Index

_

__init__() (compass.landice.Landice method) (compass.landice.tests.circular_shelf.CircularShelf method) (compass.landice.tests.circular_shelf.decomposition_test.DecompositionTest method) (compass.landice.tests.circular_shelf.run_model.RunModel method) (compass.landice.tests.circular_shelf.setup_mesh.SetupMesh method) (compass.landice.tests.circular_shelf.visualize.Visualize method) (compass.landice.tests.dome.decomposition_test.DecompositionTest method) (compass.landice.tests.dome.Dome method) (compass.landice.tests.dome.restart_test.RestartTest method) (compass.landice.tests.dome.run_model.RunModel method) (compass.landice.tests.dome.setup_mesh.SetupMesh method) (compass.landice.tests.dome.smoke_test.SmokeTest method) (compass.landice.tests.dome.visualize.Visualize method) (compass.landice.tests.eismint2.decomposition_test.DecompositionTest method) (compass.landice.tests.eismint2.Eismint2 method) (compass.landice.tests.eismint2.restart_test.RestartTest method) (compass.landice.tests.eismint2.run_experiment.RunExperiment method) (compass.landice.tests.eismint2.setup_mesh.SetupMesh method) (compass.landice.tests.eismint2.standard_experiments.StandardExperiments method) (compass.landice.tests.eismint2.standard_experiments.visualize.Visualize method) (compass.landice.tests.enthalpy_benchmark.A.A method) (compass.landice.tests.enthalpy_benchmark.A.visualize.Visualize method) (compass.landice.tests.enthalpy_benchmark.B.B method) (compass.landice.tests.enthalpy_benchmark.B.visualize.Visualize method) (compass.landice.tests.enthalpy_benchmark.EnthalpyBenchmark method) (compass.landice.tests.enthalpy_benchmark.run_model.RunModel method) (compass.landice.tests.enthalpy_benchmark.setup_mesh.SetupMesh method) (compass.landice.tests.greenland.decomposition_test.DecompositionTest method) (compass.landice.tests.greenland.Greenland method) (compass.landice.tests.greenland.restart_test.RestartTest method) (compass.landice.tests.greenland.run_model.RunModel method) (compass.landice.tests.greenland.smoke_test.SmokeTest method) (compass.landice.tests.humboldt.default.Default method) (compass.landice.tests.humboldt.Humboldt method) (compass.landice.tests.humboldt.mesh.Mesh method) (compass.landice.tests.hydro_radial.decomposition_test.DecompositionTest method) (compass.landice.tests.hydro_radial.HydroRadial method) (compass.landice.tests.hydro_radial.restart_test.RestartTest method) (compass.landice.tests.hydro_radial.run_model.RunModel method) (compass.landice.tests.hydro_radial.setup_mesh.SetupMesh method) (compass.landice.tests.hydro_radial.spinup_test.SpinupTest method) (compass.landice.tests.hydro_radial.steady_state_drift_test.SteadyStateDriftTest method) (compass.landice.tests.hydro_radial.visualize.Visualize method) (compass.landice.tests.thwaites.decomposition_test.DecompositionTest method) (compass.landice.tests.thwaites.restart_test.RestartTest method) (compass.landice.tests.thwaites.run_model.RunModel method) (compass.landice.tests.thwaites.Thwaites method) (compass.MpasCore method) (compass.ocean.Ocean method) (compass.ocean.tests.baroclinic_channel.BaroclinicChannel method) (compass.ocean.tests.baroclinic_channel.decomp_test.DecompTest method) (compass.ocean.tests.baroclinic_channel.default.Default method) (compass.ocean.tests.baroclinic_channel.forward.Forward method) (compass.ocean.tests.baroclinic_channel.initial_state.InitialState method) (compass.ocean.tests.baroclinic_channel.restart_test.RestartTest method) (compass.ocean.tests.baroclinic_channel.rpe_test.analysis.Analysis method) (compass.ocean.tests.baroclinic_channel.rpe_test.RpeTest method) (compass.ocean.tests.baroclinic_channel.threads_test.ThreadsTest method) (compass.ocean.tests.global_convergence.cosine_bell.analysis.Analysis method) (compass.ocean.tests.global_convergence.cosine_bell.CosineBell method) (compass.ocean.tests.global_convergence.cosine_bell.forward.Forward method) (compass.ocean.tests.global_convergence.cosine_bell.init.Init method) (compass.ocean.tests.global_convergence.cosine_bell.mesh.Mesh method) (compass.ocean.tests.global_convergence.GlobalConvergence method) (compass.ocean.tests.global_ocean.analysis_test.AnalysisTest method) (compass.ocean.tests.global_ocean.daily_output_test.DailyOutputTest method) (compass.ocean.tests.global_ocean.decomp_test.DecompTest method) (compass.ocean.tests.global_ocean.dynamic_adjustment.DynamicAdjustment method) (compass.ocean.tests.global_ocean.files_for_e3sm.diagnostics_files.DiagnosticsFiles method) (compass.ocean.tests.global_ocean.files_for_e3sm.FilesForE3SM method) (compass.ocean.tests.global_ocean.files_for_e3sm.ocean_graph_partition.OceanGraphPartition method) (compass.ocean.tests.global_ocean.files_for_e3sm.ocean_initial_condition.OceanInitialCondition method) (compass.ocean.tests.global_ocean.files_for_e3sm.scrip.Scrip method) (compass.ocean.tests.global_ocean.files_for_e3sm.seaice_initial_condition.SeaiceInitialCondition method) (compass.ocean.tests.global_ocean.forward.ForwardStep method) (compass.ocean.tests.global_ocean.forward.ForwardTestCase method) (compass.ocean.tests.global_ocean.GlobalOcean method) (compass.ocean.tests.global_ocean.init.Init method) (compass.ocean.tests.global_ocean.init.initial_state.InitialState method) (compass.ocean.tests.global_ocean.init.ssh_adjustment.SshAdjustment method) (compass.ocean.tests.global_ocean.mesh.ec30to60.dynamic_adjustment.EC30to60DynamicAdjustment method) (compass.ocean.tests.global_ocean.mesh.ec30to60.EC30to60Mesh method) (compass.ocean.tests.global_ocean.mesh.Mesh method) (compass.ocean.tests.global_ocean.mesh.mesh.MeshStep method) (compass.ocean.tests.global_ocean.mesh.qu240.dynamic_adjustment.QU240DynamicAdjustment method) (compass.ocean.tests.global_ocean.mesh.qu240.QU240Mesh method) (compass.ocean.tests.global_ocean.mesh.so12to60.dynamic_adjustment.SO12to60DynamicAdjustment method) (compass.ocean.tests.global_ocean.mesh.so12to60.SO12to60Mesh method) (compass.ocean.tests.global_ocean.mesh.wc14.dynamic_adjustment.WC14DynamicAdjustment method) (compass.ocean.tests.global_ocean.mesh.wc14.WC14Mesh method) (compass.ocean.tests.global_ocean.performance_test.PerformanceTest method) (compass.ocean.tests.global_ocean.restart_test.RestartTest method) (compass.ocean.tests.global_ocean.threads_test.ThreadsTest method) (compass.ocean.tests.gotm.default.analysis.Analysis method) (compass.ocean.tests.gotm.default.Default method) (compass.ocean.tests.gotm.default.forward.Forward method) (compass.ocean.tests.gotm.default.init.Init method) (compass.ocean.tests.gotm.Gotm method) (compass.ocean.tests.ice_shelf_2d.default.Default method) (compass.ocean.tests.ice_shelf_2d.forward.Forward method) (compass.ocean.tests.ice_shelf_2d.IceShelf2d method) (compass.ocean.tests.ice_shelf_2d.initial_state.InitialState method) (compass.ocean.tests.ice_shelf_2d.restart_test.RestartTest method) (compass.ocean.tests.ice_shelf_2d.ssh_adjustment.SshAdjustment method) (compass.ocean.tests.ice_shelf_2d.viz.Viz method) (compass.ocean.tests.internal_wave.default.Default method) (compass.ocean.tests.internal_wave.forward.Forward method) (compass.ocean.tests.internal_wave.initial_state.InitialState method) (compass.ocean.tests.internal_wave.InternalWave method) (compass.ocean.tests.internal_wave.rpe_test.analysis.Analysis method) (compass.ocean.tests.internal_wave.rpe_test.RpeTest method) (compass.ocean.tests.internal_wave.ten_day_test.TenDayTest method) (compass.ocean.tests.internal_wave.viz.Viz method) (compass.ocean.tests.isomip_plus.forward.Forward method) (compass.ocean.tests.isomip_plus.initial_state.InitialState method) (compass.ocean.tests.isomip_plus.IsomipPlus method) (compass.ocean.tests.isomip_plus.misomip.Misomip method) (compass.ocean.tests.isomip_plus.ocean_test.OceanTest method) (compass.ocean.tests.isomip_plus.ssh_adjustment.SshAdjustment method) (compass.ocean.tests.isomip_plus.streamfunction.Streamfunction method) (compass.ocean.tests.isomip_plus.viz.plot.MoviePlotter method) (compass.ocean.tests.isomip_plus.viz.plot.TimeSeriesPlotter method) (compass.ocean.tests.isomip_plus.viz.Viz method) (compass.ocean.tests.planar_convergence.conv_init.ConvInit method) (compass.ocean.tests.planar_convergence.conv_test_case.ConvTestCase method) (compass.ocean.tests.planar_convergence.forward.Forward method) (compass.ocean.tests.planar_convergence.horizontal_advection.analysis.Analysis method) (compass.ocean.tests.planar_convergence.horizontal_advection.HorizontalAdvection method) (compass.ocean.tests.planar_convergence.horizontal_advection.init.Init method) (compass.ocean.tests.planar_convergence.PlanarConvergence method) (compass.ocean.tests.soma.analysis.Analysis method) (compass.ocean.tests.soma.forward.Forward method) (compass.ocean.tests.soma.initial_state.InitialState method) (compass.ocean.tests.soma.Soma method) (compass.ocean.tests.soma.soma_test_case.SomaTestCase method) (compass.ocean.tests.sphere_transport.correlated_tracers_2d.analysis.Analysis method) (compass.ocean.tests.sphere_transport.correlated_tracers_2d.CorrelatedTracers2D method) (compass.ocean.tests.sphere_transport.correlated_tracers_2d.forward.Forward method) (compass.ocean.tests.sphere_transport.correlated_tracers_2d.init.Init method) (compass.ocean.tests.sphere_transport.correlated_tracers_2d.mesh.Mesh method) (compass.ocean.tests.sphere_transport.divergent_2d.analysis.Analysis method) (compass.ocean.tests.sphere_transport.divergent_2d.Divergent2D method) (compass.ocean.tests.sphere_transport.divergent_2d.forward.Forward method) (compass.ocean.tests.sphere_transport.divergent_2d.init.Init method) (compass.ocean.tests.sphere_transport.divergent_2d.mesh.Mesh method) (compass.ocean.tests.sphere_transport.nondivergent_2d.analysis.Analysis method) (compass.ocean.tests.sphere_transport.nondivergent_2d.forward.Forward method) (compass.ocean.tests.sphere_transport.nondivergent_2d.init.Init method) (compass.ocean.tests.sphere_transport.nondivergent_2d.mesh.Mesh method) (compass.ocean.tests.sphere_transport.nondivergent_2d.Nondivergent2D method) (compass.ocean.tests.sphere_transport.rotation_2d.analysis.Analysis method) (compass.ocean.tests.sphere_transport.rotation_2d.forward.Forward method) (compass.ocean.tests.sphere_transport.rotation_2d.init.Init method) (compass.ocean.tests.sphere_transport.rotation_2d.mesh.Mesh method) (compass.ocean.tests.sphere_transport.rotation_2d.Rotation2D method) (compass.ocean.tests.sphere_transport.SphereTransport method) (compass.ocean.tests.ziso.forward.Forward method) (compass.ocean.tests.ziso.initial_state.InitialState method) (compass.ocean.tests.ziso.with_frazil.WithFrazil method) (compass.ocean.tests.ziso.Ziso method) (compass.ocean.tests.ziso.ZisoTestCase method) (compass.Step method) (compass.TestCase method) (compass.TestGroup method)

A

A (class in compass.landice.tests.enthalpy_benchmark.A) add_config() (in module compass.config) add_input_file() (compass.Step method) add_mesh_and_init_metadata() (in module compass.ocean.tests.global_ocean.metadata) add_model_as_input() (compass.Step method) add_namelist_file() (compass.Step method) add_namelist_options() (compass.Step method) add_output_file() (compass.Step method) add_step() (compass.TestCase method) add_streams_file() (compass.Step method) add_test_case() (compass.TestGroup method) add_test_group() (compass.MpasCore method) adjust_ssh() (in module compass.ocean.iceshelf)

alter_bottom_depth() (in module compass.ocean.vertical.partial_cells) alter_ssh() (in module compass.ocean.vertical.partial_cells) Analysis (class in compass.ocean.tests.baroclinic_channel.rpe_test.analysis) (class in compass.ocean.tests.global_convergence.cosine_bell.analysis) (class in compass.ocean.tests.gotm.default.analysis) (class in compass.ocean.tests.internal_wave.rpe_test.analysis) (class in compass.ocean.tests.planar_convergence.horizontal_advection.analysis) (class in compass.ocean.tests.soma.analysis) (class in compass.ocean.tests.sphere_transport.correlated_tracers_2d.analysis) (class in compass.ocean.tests.sphere_transport.divergent_2d.analysis) (class in compass.ocean.tests.sphere_transport.nondivergent_2d.analysis) (class in compass.ocean.tests.sphere_transport.rotation_2d.analysis) AnalysisTest (class in compass.ocean.tests.global_ocean.analysis_test)

B

B (class in compass.landice.tests.enthalpy_benchmark.B) BaroclinicChannel (class in compass.ocean.tests.baroclinic_channel) build_cell_width_lat_lon() (compass.ocean.tests.global_convergence.cosine_bell.mesh.Mesh method) (compass.ocean.tests.global_ocean.mesh.ec30to60.EC30to60Mesh method) (compass.ocean.tests.global_ocean.mesh.mesh.MeshStep method) (compass.ocean.tests.global_ocean.mesh.qu240.QU240Mesh method) (compass.ocean.tests.global_ocean.mesh.so12to60.SO12to60Mesh method) (compass.ocean.tests.global_ocean.mesh.wc14.WC14Mesh method) (compass.ocean.tests.sphere_transport.correlated_tracers_2d.mesh.Mesh method) (compass.ocean.tests.sphere_transport.divergent_2d.mesh.Mesh method) (compass.ocean.tests.sphere_transport.nondivergent_2d.mesh.Mesh method) (compass.ocean.tests.sphere_transport.rotation_2d.mesh.Mesh method)

C

CircularShelf (class in compass.landice.tests.circular_shelf) clean_cases() (in module compass.clean) clean_suite() (in module compass.suite) compare_timers() (in module compass.validate) compare_variables() (in module compass.validate) compass.ocean.tests.global_ocean.configure module compute_convergence_rates() (in module compass.ocean.tests.sphere_transport.process_output) compute_error_from_output_ncfile() (in module compass.ocean.tests.sphere_transport.process_output) compute_haney_number() (in module compass.ocean.haney) compute_land_ice_pressure_and_draft() (in module compass.ocean.iceshelf) compute_min_max_level_cell() (in module compass.ocean.vertical.zlevel) compute_z_level_layer_thickness() (in module compass.ocean.vertical.zlevel) compute_z_level_resting_thickness() (in module compass.ocean.vertical.zlevel) configure() (compass.landice.tests.enthalpy_benchmark.A.A method) (compass.landice.tests.enthalpy_benchmark.B.B method) (compass.ocean.tests.baroclinic_channel.decomp_test.DecompTest method) (compass.ocean.tests.baroclinic_channel.default.Default method) (compass.ocean.tests.baroclinic_channel.restart_test.RestartTest method) (compass.ocean.tests.baroclinic_channel.rpe_test.RpeTest method) (compass.ocean.tests.baroclinic_channel.threads_test.ThreadsTest method) (compass.ocean.tests.global_convergence.cosine_bell.CosineBell method) (compass.ocean.tests.global_ocean.analysis_test.AnalysisTest method) (compass.ocean.tests.global_ocean.daily_output_test.DailyOutputTest method) (compass.ocean.tests.global_ocean.decomp_test.DecompTest method) (compass.ocean.tests.global_ocean.files_for_e3sm.FilesForE3SM method) (compass.ocean.tests.global_ocean.forward.ForwardTestCase method) (compass.ocean.tests.global_ocean.init.Init method) (compass.ocean.tests.global_ocean.mesh.ec30to60.dynamic_adjustment.EC30to60DynamicAdjustment method) (compass.ocean.tests.global_ocean.mesh.Mesh method) (compass.ocean.tests.global_ocean.mesh.qu240.dynamic_adjustment.QU240DynamicAdjustment method) (compass.ocean.tests.global_ocean.mesh.so12to60.dynamic_adjustment.SO12to60DynamicAdjustment method) (compass.ocean.tests.global_ocean.mesh.wc14.dynamic_adjustment.WC14DynamicAdjustment method) (compass.ocean.tests.global_ocean.performance_test.PerformanceTest method) (compass.ocean.tests.global_ocean.restart_test.RestartTest method) (compass.ocean.tests.global_ocean.threads_test.ThreadsTest method) (compass.ocean.tests.ice_shelf_2d.default.Default method) (compass.ocean.tests.ice_shelf_2d.restart_test.RestartTest method) (compass.ocean.tests.isomip_plus.ocean_test.OceanTest method) (compass.ocean.tests.planar_convergence.conv_test_case.ConvTestCase method) (compass.ocean.tests.planar_convergence.horizontal_advection.HorizontalAdvection method) (compass.ocean.tests.sphere_transport.correlated_tracers_2d.CorrelatedTracers2D method) (compass.ocean.tests.sphere_transport.divergent_2d.Divergent2D method) (compass.ocean.tests.sphere_transport.nondivergent_2d.Nondivergent2D method) (compass.ocean.tests.sphere_transport.rotation_2d.Rotation2D method) (compass.ocean.tests.ziso.with_frazil.WithFrazil method) (compass.ocean.tests.ziso.ZisoTestCase method) (compass.TestCase method) (in module compass.ocean.tests.baroclinic_channel) (in module compass.ocean.tests.ice_shelf_2d) (in module compass.ocean.tests.ziso)

configure_global_ocean() (in module compass.ocean.tests.global_ocean.configure) ConvInit (class in compass.ocean.tests.planar_convergence.conv_init) ConvTestCase (class in compass.ocean.tests.planar_convergence.conv_test_case) CorrelatedTracers2D (class in compass.ocean.tests.sphere_transport.correlated_tracers_2d) CosineBell (class in compass.ocean.tests.global_convergence.cosine_bell) cull_mesh() (in module compass.ocean.tests.global_ocean.mesh.cull)

D

DailyOutputTest (class in compass.ocean.tests.global_ocean.daily_output_test) DecompositionTest (class in compass.landice.tests.circular_shelf.decomposition_test) (class in compass.landice.tests.dome.decomposition_test) (class in compass.landice.tests.eismint2.decomposition_test) (class in compass.landice.tests.greenland.decomposition_test) (class in compass.landice.tests.hydro_radial.decomposition_test) (class in compass.landice.tests.thwaites.decomposition_test) DecompTest (class in compass.ocean.tests.baroclinic_channel.decomp_test) (class in compass.ocean.tests.global_ocean.decomp_test) Default (class in compass.landice.tests.humboldt.default) (class in compass.ocean.tests.baroclinic_channel.default) (class in compass.ocean.tests.gotm.default) (class in compass.ocean.tests.ice_shelf_2d.default) (class in compass.ocean.tests.internal_wave.default)

DiagnosticsFiles (class in compass.ocean.tests.global_ocean.files_for_e3sm.diagnostics_files) Divergent2D (class in compass.ocean.tests.sphere_transport.divergent_2d) Dome (class in compass.landice.tests.dome) download() (in module compass.io) duplicate_config() (in module compass.config) DynamicAdjustment (class in compass.ocean.tests.global_ocean.dynamic_adjustment)

E

EC30to60DynamicAdjustment (class in compass.ocean.tests.global_ocean.mesh.ec30to60.dynamic_adjustment) EC30to60Mesh (class in compass.ocean.tests.global_ocean.mesh.ec30to60)

Eismint2 (class in compass.landice.tests.eismint2) ensure_absolute_paths() (in module compass.config) EnthalpyBenchmark (class in compass.landice.tests.enthalpy_benchmark)

F

file_complete() (in module compass.ocean.tests.isomip_plus.viz) FilesForE3SM (class in compass.ocean.tests.global_ocean.files_for_e3sm) Forward (class in compass.ocean.tests.baroclinic_channel.forward) (class in compass.ocean.tests.global_convergence.cosine_bell.forward) (class in compass.ocean.tests.gotm.default.forward) (class in compass.ocean.tests.ice_shelf_2d.forward) (class in compass.ocean.tests.internal_wave.forward) (class in compass.ocean.tests.isomip_plus.forward) (class in compass.ocean.tests.planar_convergence.forward) (class in compass.ocean.tests.soma.forward) (class in compass.ocean.tests.sphere_transport.correlated_tracers_2d.forward) (class in compass.ocean.tests.sphere_transport.divergent_2d.forward) (class in compass.ocean.tests.sphere_transport.nondivergent_2d.forward) (class in compass.ocean.tests.sphere_transport.rotation_2d.forward) (class in compass.ocean.tests.ziso.forward)

ForwardStep (class in compass.ocean.tests.global_ocean.forward) ForwardTestCase (class in compass.ocean.tests.global_ocean.forward)

G

generate_1d_grid() (in module compass.ocean.vertical.grid_1d) get_available_cores_and_nodes() (in module compass.parallel) get_dt() (compass.ocean.tests.global_convergence.cosine_bell.forward.Forward method) get_dt_duration() (compass.ocean.tests.planar_convergence.forward.Forward method) get_e3sm_mesh_names() (in module compass.ocean.tests.global_ocean.metadata) get_mpas_cores() (in module compass.mpas_cores) get_source_file() (in module compass.config)

get_timestep_str() (compass.ocean.tests.sphere_transport.correlated_tracers_2d.forward.Forward method) (compass.ocean.tests.sphere_transport.divergent_2d.forward.Forward method) (compass.ocean.tests.sphere_transport.nondivergent_2d.forward.Forward method) (compass.ocean.tests.sphere_transport.rotation_2d.forward.Forward method) GlobalConvergence (class in compass.ocean.tests.global_convergence) GlobalOcean (class in compass.ocean.tests.global_ocean) Gotm (class in compass.ocean.tests.gotm) Greenland (class in compass.landice.tests.greenland)

H

HorizontalAdvection (class in compass.ocean.tests.planar_convergence.horizontal_advection)

Humboldt (class in compass.landice.tests.humboldt) HydroRadial (class in compass.landice.tests.hydro_radial)

I

IceShelf2d (class in compass.ocean.tests.ice_shelf_2d) images_to_movies() (compass.ocean.tests.isomip_plus.viz.plot.MoviePlotter method) Init (class in compass.ocean.tests.global_convergence.cosine_bell.init) (class in compass.ocean.tests.global_ocean.init) (class in compass.ocean.tests.gotm.default.init) (class in compass.ocean.tests.planar_convergence.horizontal_advection.init) (class in compass.ocean.tests.sphere_transport.correlated_tracers_2d.init) (class in compass.ocean.tests.sphere_transport.divergent_2d.init) (class in compass.ocean.tests.sphere_transport.nondivergent_2d.init) (class in compass.ocean.tests.sphere_transport.rotation_2d.init) init_vertical_coord() (in module compass.ocean.vertical)

init_z_level_vertical_coord() (in module compass.ocean.vertical.zlevel) init_z_star_vertical_coord() (in module compass.ocean.vertical.zstar) InitialState (class in compass.ocean.tests.baroclinic_channel.initial_state) (class in compass.ocean.tests.global_ocean.init.initial_state) (class in compass.ocean.tests.ice_shelf_2d.initial_state) (class in compass.ocean.tests.internal_wave.initial_state) (class in compass.ocean.tests.isomip_plus.initial_state) (class in compass.ocean.tests.soma.initial_state) (class in compass.ocean.tests.ziso.initial_state) InternalWave (class in compass.ocean.tests.internal_wave) interpolate_ocean_mask() (in module compass.ocean.tests.isomip_plus.geom) IsomipPlus (class in compass.ocean.tests.isomip_plus)

L

Landice (class in compass.landice) list_cases() (in module compass.list)

list_machines() (in module compass.list) list_suites() (in module compass.list) log_method_call() (in module compass.logging)

M

main() (in module compass.__main__) make_convergence_arrays() (in module compass.ocean.tests.sphere_transport.process_output) make_graph_file() (in module compass.model) Mesh (class in compass.landice.tests.humboldt.mesh) (class in compass.ocean.tests.global_convergence.cosine_bell.mesh) (class in compass.ocean.tests.global_ocean.mesh) (class in compass.ocean.tests.sphere_transport.correlated_tracers_2d.mesh) (class in compass.ocean.tests.sphere_transport.divergent_2d.mesh) (class in compass.ocean.tests.sphere_transport.nondivergent_2d.mesh) (class in compass.ocean.tests.sphere_transport.rotation_2d.mesh)

MeshStep (class in compass.ocean.tests.global_ocean.mesh.mesh) Misomip (class in compass.ocean.tests.isomip_plus.misomip) module compass.ocean.tests.global_ocean.configure MoviePlotter (class in compass.ocean.tests.isomip_plus.viz.plot) MpasCore (class in compass)

N

Nondivergent2D (class in compass.ocean.tests.sphere_transport.nondivergent_2d)

O

Ocean (class in compass.ocean) OceanGraphPartition (class in compass.ocean.tests.global_ocean.files_for_e3sm.ocean_graph_partition)

OceanInitialCondition (class in compass.ocean.tests.global_ocean.files_for_e3sm.ocean_initial_condition) OceanTest (class in compass.ocean.tests.isomip_plus.ocean_test)

P

partition() (in module compass.model) PerformanceTest (class in compass.ocean.tests.global_ocean.performance_test) PlanarConvergence (class in compass.ocean.tests.planar_convergence) plot_3d_field_top_bot_section() (compass.ocean.tests.isomip_plus.viz.plot.MoviePlotter method) plot_barotropic_streamfunction() (compass.ocean.tests.isomip_plus.viz.plot.MoviePlotter method) plot_convergence() (in module compass.ocean.tests.sphere_transport.process_output) plot_filament() (in module compass.ocean.tests.sphere_transport.process_output) plot_horiz_series() (compass.ocean.tests.isomip_plus.viz.plot.MoviePlotter method) plot_ice_shelf_boundary_variables() (compass.ocean.tests.isomip_plus.viz.plot.MoviePlotter method) plot_initial_state() (in module compass.ocean.plot) plot_layer_interfaces() (compass.ocean.tests.isomip_plus.viz.plot.MoviePlotter method) plot_melt_rates() (compass.ocean.tests.isomip_plus.viz.plot.MoviePlotter method)

plot_melt_time_series() (compass.ocean.tests.isomip_plus.viz.plot.TimeSeriesPlotter method) plot_over_and_undershoot_errors() (in module compass.ocean.tests.sphere_transport.process_output) plot_overturning_streamfunction() (compass.ocean.tests.isomip_plus.viz.plot.MoviePlotter method) plot_potential_density() (compass.ocean.tests.isomip_plus.viz.plot.MoviePlotter method) plot_salinity() (compass.ocean.tests.isomip_plus.viz.plot.MoviePlotter method) plot_sol() (in module compass.ocean.tests.sphere_transport.process_output) plot_temperature() (compass.ocean.tests.isomip_plus.viz.plot.MoviePlotter method) plot_time_series() (compass.ocean.tests.isomip_plus.viz.plot.TimeSeriesPlotter method) plot_vertical_grid() (in module compass.ocean.plot) print_data_as_csv() (in module compass.ocean.tests.sphere_transport.process_output) print_error_conv_table() (in module compass.ocean.tests.sphere_transport.process_output) process_input_geometry() (in module compass.ocean.tests.isomip_plus.geom)

Q

QU240DynamicAdjustment (class in compass.ocean.tests.global_ocean.mesh.qu240.dynamic_adjustment)

QU240Mesh (class in compass.ocean.tests.global_ocean.mesh.qu240)

R

read_ncl_rgb_file() (in module compass.ocean.tests.sphere_transport.process_output) remap_particles() (in module compass.ocean.particles) RestartTest (class in compass.landice.tests.dome.restart_test) (class in compass.landice.tests.eismint2.restart_test) (class in compass.landice.tests.greenland.restart_test) (class in compass.landice.tests.hydro_radial.restart_test) (class in compass.landice.tests.thwaites.restart_test) (class in compass.ocean.tests.baroclinic_channel.restart_test) (class in compass.ocean.tests.global_ocean.restart_test) (class in compass.ocean.tests.ice_shelf_2d.restart_test) rmse() (compass.ocean.tests.global_convergence.cosine_bell.analysis.Analysis method) (compass.ocean.tests.planar_convergence.horizontal_advection.analysis.Analysis method) Rotation2D (class in compass.ocean.tests.sphere_transport.rotation_2d) RpeTest (class in compass.ocean.tests.baroclinic_channel.rpe_test) (class in compass.ocean.tests.internal_wave.rpe_test) run() (compass.landice.tests.circular_shelf.decomposition_test.DecompositionTest method) (compass.landice.tests.circular_shelf.run_model.RunModel method) (compass.landice.tests.circular_shelf.setup_mesh.SetupMesh method) (compass.landice.tests.circular_shelf.visualize.Visualize method) (compass.landice.tests.dome.decomposition_test.DecompositionTest method) (compass.landice.tests.dome.restart_test.RestartTest method) (compass.landice.tests.dome.run_model.RunModel method) (compass.landice.tests.dome.setup_mesh.SetupMesh method) (compass.landice.tests.dome.smoke_test.SmokeTest method) (compass.landice.tests.dome.visualize.Visualize method) (compass.landice.tests.eismint2.decomposition_test.DecompositionTest method) (compass.landice.tests.eismint2.restart_test.RestartTest method) (compass.landice.tests.eismint2.run_experiment.RunExperiment method) (compass.landice.tests.eismint2.setup_mesh.SetupMesh method) (compass.landice.tests.eismint2.standard_experiments.StandardExperiments method) (compass.landice.tests.eismint2.standard_experiments.visualize.Visualize method) (compass.landice.tests.enthalpy_benchmark.A.A method) (compass.landice.tests.enthalpy_benchmark.A.visualize.Visualize method) (compass.landice.tests.enthalpy_benchmark.B.B method) (compass.landice.tests.enthalpy_benchmark.B.visualize.Visualize method) (compass.landice.tests.enthalpy_benchmark.run_model.RunModel method) (compass.landice.tests.enthalpy_benchmark.setup_mesh.SetupMesh method) (compass.landice.tests.greenland.decomposition_test.DecompositionTest method) (compass.landice.tests.greenland.restart_test.RestartTest method) (compass.landice.tests.greenland.run_model.RunModel method) (compass.landice.tests.greenland.smoke_test.SmokeTest method) (compass.landice.tests.humboldt.default.Default method) (compass.landice.tests.humboldt.mesh.Mesh method) (compass.landice.tests.hydro_radial.decomposition_test.DecompositionTest method) (compass.landice.tests.hydro_radial.restart_test.RestartTest method) (compass.landice.tests.hydro_radial.run_model.RunModel method) (compass.landice.tests.hydro_radial.setup_mesh.SetupMesh method) (compass.landice.tests.hydro_radial.spinup_test.SpinupTest method) (compass.landice.tests.hydro_radial.steady_state_drift_test.SteadyStateDriftTest method) (compass.landice.tests.hydro_radial.visualize.Visualize method) (compass.landice.tests.thwaites.decomposition_test.DecompositionTest method) (compass.landice.tests.thwaites.restart_test.RestartTest method) (compass.landice.tests.thwaites.run_model.RunModel method) (compass.ocean.tests.baroclinic_channel.decomp_test.DecompTest method) (compass.ocean.tests.baroclinic_channel.default.Default method) (compass.ocean.tests.baroclinic_channel.forward.Forward method) (compass.ocean.tests.baroclinic_channel.initial_state.InitialState method) (compass.ocean.tests.baroclinic_channel.restart_test.RestartTest method) (compass.ocean.tests.baroclinic_channel.rpe_test.analysis.Analysis method) (compass.ocean.tests.baroclinic_channel.rpe_test.RpeTest method) (compass.ocean.tests.baroclinic_channel.threads_test.ThreadsTest method) (compass.ocean.tests.global_convergence.cosine_bell.analysis.Analysis method) (compass.ocean.tests.global_convergence.cosine_bell.CosineBell method) (compass.ocean.tests.global_convergence.cosine_bell.forward.Forward method) (compass.ocean.tests.global_convergence.cosine_bell.init.Init method) (compass.ocean.tests.global_convergence.cosine_bell.mesh.Mesh method) (compass.ocean.tests.global_ocean.analysis_test.AnalysisTest method) (compass.ocean.tests.global_ocean.daily_output_test.DailyOutputTest method) (compass.ocean.tests.global_ocean.decomp_test.DecompTest method) (compass.ocean.tests.global_ocean.dynamic_adjustment.DynamicAdjustment method) (compass.ocean.tests.global_ocean.files_for_e3sm.diagnostics_files.DiagnosticsFiles method) (compass.ocean.tests.global_ocean.files_for_e3sm.FilesForE3SM method) (compass.ocean.tests.global_ocean.files_for_e3sm.ocean_graph_partition.OceanGraphPartition method) (compass.ocean.tests.global_ocean.files_for_e3sm.ocean_initial_condition.OceanInitialCondition method) (compass.ocean.tests.global_ocean.files_for_e3sm.scrip.Scrip method) (compass.ocean.tests.global_ocean.files_for_e3sm.seaice_initial_condition.SeaiceInitialCondition method) (compass.ocean.tests.global_ocean.forward.ForwardStep method) (compass.ocean.tests.global_ocean.forward.ForwardTestCase method) (compass.ocean.tests.global_ocean.init.Init method) (compass.ocean.tests.global_ocean.init.initial_state.InitialState method) (compass.ocean.tests.global_ocean.init.ssh_adjustment.SshAdjustment method) (compass.ocean.tests.global_ocean.mesh.ec30to60.dynamic_adjustment.EC30to60DynamicAdjustment method) (compass.ocean.tests.global_ocean.mesh.Mesh method) (compass.ocean.tests.global_ocean.mesh.mesh.MeshStep method) (compass.ocean.tests.global_ocean.mesh.qu240.dynamic_adjustment.QU240DynamicAdjustment method) (compass.ocean.tests.global_ocean.mesh.so12to60.dynamic_adjustment.SO12to60DynamicAdjustment method) (compass.ocean.tests.global_ocean.mesh.wc14.dynamic_adjustment.WC14DynamicAdjustment method) (compass.ocean.tests.global_ocean.performance_test.PerformanceTest method) (compass.ocean.tests.global_ocean.restart_test.RestartTest method) (compass.ocean.tests.global_ocean.threads_test.ThreadsTest method) (compass.ocean.tests.gotm.default.analysis.Analysis method) (compass.ocean.tests.gotm.default.forward.Forward method) (compass.ocean.tests.gotm.default.init.Init method) (compass.ocean.tests.ice_shelf_2d.default.Default method) (compass.ocean.tests.ice_shelf_2d.forward.Forward method) (compass.ocean.tests.ice_shelf_2d.initial_state.InitialState method) (compass.ocean.tests.ice_shelf_2d.restart_test.RestartTest method) (compass.ocean.tests.ice_shelf_2d.ssh_adjustment.SshAdjustment method) (compass.ocean.tests.ice_shelf_2d.viz.Viz method) (compass.ocean.tests.internal_wave.forward.Forward method) (compass.ocean.tests.internal_wave.initial_state.InitialState method) (compass.ocean.tests.internal_wave.rpe_test.analysis.Analysis method) (compass.ocean.tests.internal_wave.viz.Viz method) (compass.ocean.tests.isomip_plus.forward.Forward method) (compass.ocean.tests.isomip_plus.initial_state.InitialState method) (compass.ocean.tests.isomip_plus.misomip.Misomip method) (compass.ocean.tests.isomip_plus.ocean_test.OceanTest method) (compass.ocean.tests.isomip_plus.ssh_adjustment.SshAdjustment method) (compass.ocean.tests.isomip_plus.streamfunction.Streamfunction method) (compass.ocean.tests.isomip_plus.viz.Viz method) (compass.ocean.tests.planar_convergence.conv_init.ConvInit method) (compass.ocean.tests.planar_convergence.conv_test_case.ConvTestCase method) (compass.ocean.tests.planar_convergence.forward.Forward method) (compass.ocean.tests.planar_convergence.horizontal_advection.analysis.Analysis method) (compass.ocean.tests.planar_convergence.horizontal_advection.HorizontalAdvection method) (compass.ocean.tests.planar_convergence.horizontal_advection.init.Init method) (compass.ocean.tests.soma.analysis.Analysis method) (compass.ocean.tests.soma.forward.Forward method) (compass.ocean.tests.soma.initial_state.InitialState method) (compass.ocean.tests.sphere_transport.correlated_tracers_2d.analysis.Analysis method) (compass.ocean.tests.sphere_transport.correlated_tracers_2d.CorrelatedTracers2D method) (compass.ocean.tests.sphere_transport.correlated_tracers_2d.forward.Forward method) (compass.ocean.tests.sphere_transport.correlated_tracers_2d.init.Init method) (compass.ocean.tests.sphere_transport.correlated_tracers_2d.mesh.Mesh method) (compass.ocean.tests.sphere_transport.divergent_2d.analysis.Analysis method) (compass.ocean.tests.sphere_transport.divergent_2d.Divergent2D method) (compass.ocean.tests.sphere_transport.divergent_2d.forward.Forward method) (compass.ocean.tests.sphere_transport.divergent_2d.init.Init method) (compass.ocean.tests.sphere_transport.divergent_2d.mesh.Mesh method) (compass.ocean.tests.sphere_transport.nondivergent_2d.analysis.Analysis method) (compass.ocean.tests.sphere_transport.nondivergent_2d.forward.Forward method) (compass.ocean.tests.sphere_transport.nondivergent_2d.init.Init method) (compass.ocean.tests.sphere_transport.nondivergent_2d.mesh.Mesh method) (compass.ocean.tests.sphere_transport.nondivergent_2d.Nondivergent2D method) (compass.ocean.tests.sphere_transport.rotation_2d.analysis.Analysis method) (compass.ocean.tests.sphere_transport.rotation_2d.forward.Forward method) (compass.ocean.tests.sphere_transport.rotation_2d.init.Init method) (compass.ocean.tests.sphere_transport.rotation_2d.mesh.Mesh method) (compass.ocean.tests.sphere_transport.rotation_2d.Rotation2D method) (compass.ocean.tests.ziso.forward.Forward method) (compass.ocean.tests.ziso.initial_state.InitialState method) (compass.ocean.tests.ziso.with_frazil.WithFrazil method) (compass.ocean.tests.ziso.ZisoTestCase method) (compass.Step method) (compass.TestCase method)

run_model() (in module compass.model) run_step() (in module compass.run) run_suite() (in module compass.run) run_test_case() (in module compass.run) RunExperiment (class in compass.landice.tests.eismint2.run_experiment) RunModel (class in compass.landice.tests.circular_shelf.run_model) (class in compass.landice.tests.dome.run_model) (class in compass.landice.tests.enthalpy_benchmark.run_model) (class in compass.landice.tests.greenland.run_model) (class in compass.landice.tests.hydro_radial.run_model) (class in compass.landice.tests.thwaites.run_model)

S

Scrip (class in compass.ocean.tests.global_ocean.files_for_e3sm.scrip) SeaiceInitialCondition (class in compass.ocean.tests.global_ocean.files_for_e3sm.seaice_initial_condition) setup() (compass.landice.tests.dome.run_model.RunModel method) (compass.landice.tests.eismint2.run_experiment.RunExperiment method) (compass.landice.tests.enthalpy_benchmark.run_model.RunModel method) (compass.landice.tests.greenland.run_model.RunModel method) (compass.landice.tests.hydro_radial.run_model.RunModel method) (compass.landice.tests.thwaites.run_model.RunModel method) (compass.ocean.tests.baroclinic_channel.forward.Forward method) (compass.ocean.tests.baroclinic_channel.initial_state.InitialState method) (compass.ocean.tests.baroclinic_channel.rpe_test.analysis.Analysis method) (compass.ocean.tests.global_convergence.cosine_bell.forward.Forward method) (compass.ocean.tests.global_ocean.forward.ForwardStep method) (compass.ocean.tests.global_ocean.init.initial_state.InitialState method) (compass.ocean.tests.global_ocean.init.ssh_adjustment.SshAdjustment method) (compass.ocean.tests.global_ocean.mesh.mesh.MeshStep method) (compass.ocean.tests.ice_shelf_2d.forward.Forward method) (compass.ocean.tests.ice_shelf_2d.ssh_adjustment.SshAdjustment method) (compass.ocean.tests.isomip_plus.forward.Forward method) (compass.ocean.tests.isomip_plus.ssh_adjustment.SshAdjustment method) (compass.ocean.tests.planar_convergence.forward.Forward method) (compass.ocean.tests.sphere_transport.correlated_tracers_2d.forward.Forward method) (compass.ocean.tests.sphere_transport.divergent_2d.forward.Forward method) (compass.ocean.tests.sphere_transport.nondivergent_2d.forward.Forward method) (compass.ocean.tests.sphere_transport.rotation_2d.forward.Forward method) (compass.ocean.tests.ziso.forward.Forward method) (compass.Step method)

setup_case() (in module compass.setup) setup_cases() (in module compass.setup) setup_suite() (in module compass.suite) SetupMesh (class in compass.landice.tests.circular_shelf.setup_mesh) (class in compass.landice.tests.dome.setup_mesh) (class in compass.landice.tests.eismint2.setup_mesh) (class in compass.landice.tests.enthalpy_benchmark.setup_mesh) (class in compass.landice.tests.hydro_radial.setup_mesh) SmokeTest (class in compass.landice.tests.dome.smoke_test) (class in compass.landice.tests.greenland.smoke_test) SO12to60DynamicAdjustment (class in compass.ocean.tests.global_ocean.mesh.so12to60.dynamic_adjustment) SO12to60Mesh (class in compass.ocean.tests.global_ocean.mesh.so12to60) Soma (class in compass.ocean.tests.soma) SomaTestCase (class in compass.ocean.tests.soma.soma_test_case) SphereTransport (class in compass.ocean.tests.sphere_transport) SpinupTest (class in compass.landice.tests.hydro_radial.spinup_test) SshAdjustment (class in compass.ocean.tests.global_ocean.init.ssh_adjustment) (class in compass.ocean.tests.ice_shelf_2d.ssh_adjustment) (class in compass.ocean.tests.isomip_plus.ssh_adjustment) StandardExperiments (class in compass.landice.tests.eismint2.standard_experiments) SteadyStateDriftTest (class in compass.landice.tests.hydro_radial.steady_state_drift_test) Step (class in compass) Streamfunction (class in compass.ocean.tests.isomip_plus.streamfunction) symlink() (in module compass.io)

T

TenDayTest (class in compass.ocean.tests.internal_wave.ten_day_test) TestCase (class in compass) TestGroup (class in compass)

ThreadsTest (class in compass.ocean.tests.baroclinic_channel.threads_test) (class in compass.ocean.tests.global_ocean.threads_test) Thwaites (class in compass.landice.tests.thwaites) TimeSeriesPlotter (class in compass.ocean.tests.isomip_plus.viz.plot)

U

update_cache() (in module compass.cache) update_cores() (compass.ocean.tests.planar_convergence.conv_test_case.ConvTestCase method) update_evaporation_flux() (in module compass.ocean.tests.isomip_plus.evap)

update_namelist_at_runtime() (compass.Step method) update_namelist_pio() (compass.Step method) update_streams_at_runtime() (compass.Step method)

V

validate() (compass.ocean.tests.gotm.default.Default method) (compass.ocean.tests.internal_wave.default.Default method) (compass.ocean.tests.internal_wave.ten_day_test.TenDayTest method) (compass.ocean.tests.soma.soma_test_case.SomaTestCase method) (compass.TestCase method) Visualize (class in compass.landice.tests.circular_shelf.visualize) (class in compass.landice.tests.dome.visualize) (class in compass.landice.tests.eismint2.standard_experiments.visualize) (class in compass.landice.tests.enthalpy_benchmark.A.visualize) (class in compass.landice.tests.enthalpy_benchmark.B.visualize) (class in compass.landice.tests.hydro_radial.visualize)

visualize_circular_shelf() (in module compass.landice.tests.circular_shelf.visualize) visualize_dome() (in module compass.landice.tests.dome.visualize) visualize_eismint2() (in module compass.landice.tests.eismint2.standard_experiments.visualize) visualize_hydro_radial() (in module compass.landice.tests.hydro_radial.visualize) Viz (class in compass.ocean.tests.ice_shelf_2d.viz) (class in compass.ocean.tests.internal_wave.viz) (class in compass.ocean.tests.isomip_plus.viz)

W

WC14DynamicAdjustment (class in compass.ocean.tests.global_ocean.mesh.wc14.dynamic_adjustment) WC14Mesh (class in compass.ocean.tests.global_ocean.mesh.wc14) WithFrazil (class in compass.ocean.tests.ziso.with_frazil)

write() (in module compass.ocean.particles) (in module compass.provenance) write_1d_grid() (in module compass.ocean.vertical.grid_1d)

Z

Ziso (class in compass.ocean.tests.ziso)

ZisoTestCase (class in compass.ocean.tests.ziso)