compass.ocean.tests.isomip_plus.initial_state.InitialState¶
- class compass.ocean.tests.isomip_plus.initial_state.InitialState(test_case, resolution, experiment, vertical_coordinate, time_varying_forcing)[source]¶
A step for creating a mesh and initial condition for ISOMIP+ test cases
- Variables
resolution (float) – The horizontal resolution (km) of the test case
experiment ({'Ocean0', 'Ocean1', 'Ocean2'}) – The ISOMIP+ experiment
vertical_coordinate (str) – The type of vertical coordinate (
z-star
,z-level
, etc.)time_varying_forcing (bool) – Whether the run includes time-varying land-ice forcing
- __init__(test_case, resolution, experiment, vertical_coordinate, time_varying_forcing)[source]¶
Create the step
- Parameters
test_case (compass.TestCase) – The test case this step belongs to
resolution (float) – The horizontal resolution (km) of the test case
experiment ({'Ocean0', 'Ocean1', 'Ocean2'}) – The ISOMIP+ experiment
vertical_coordinate (str) – The type of vertical coordinate (
z-star
,z-level
, etc.)time_varying_forcing (bool) – Whether the run includes time-varying land-ice forcing
Methods
__init__
(test_case, resolution, experiment, ...)Create the step
add_input_file
([filename, target, database, ...])Add an input file to the step (but not necessarily to the MPAS model).
add_model_as_input
()make a link to the model executable and add it to the inputs
add_namelist_file
(package, namelist[, ...])Add a file with updates to namelist options to the step to be parsed when generating a complete namelist file if and when the step gets set up.
add_namelist_options
(options[, out_name, mode])Add the namelist replacements to be parsed when generating a namelist file if and when the step gets set up.
add_output_file
(filename)Add the output file that must be produced by this step and may be made available as an input to steps, perhaps in other test cases.
add_streams_file
(package, streams[, ...])Add a streams file to the step to be parsed when generating a complete streams file if and when the step gets set up.
process_inputs_and_outputs
()Process the inputs to and outputs from a step added with
compass.Step.add_input_file()
andcompass.Step.add_output_file()
.run
()Run this step of the test case
setup
()Set up the test case in the work directory, including downloading any dependencies.
update_namelist_at_runtime
(options[, out_name])Update an existing namelist file with additional options.
update_namelist_pio
([out_name])Modify the namelist so the number of PIO tasks and the stride between them consistent with the number of nodes and cores (one PIO task per node).
update_streams_at_runtime
(package, streams, ...)Update the streams files during the run phase of this step using the given template and replacements.